Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015912333.1_cds_XP_016462402.1_55635
CDS Infomation

[gene=LOC107785578] [db_xref=GeneID:107785578] [protein=pheophytinase, chloroplastic-like] [protein_id=XP_016462402.1] [location=join(21469..21556,21650..21751,21851..21989,22439..22609,23220..23460,24525..24616,25747..26014)] [gbkey=CDS]
Sequence

ATGTCAACTTCTTGTGCCACTGTCAGAACTGAATGCTTGAACTCAGTAGGTAACAGGTTA
GCTGTGCCTGCAAGAATTAATCATTTCAGGGGCAAATGTGAATTGAATAGAAGGAATTTT
GCTTTGAATGGAATTGTTGCTGCTGGAGCTTCAGTTATGACCCCTTCTGTGGTTGCTGAA
CCCTCTAAAGGTCTGGATAAACTACCATTTAAGCCAGAGGGGTACAACTATTGGACATGG
CGCGGCCACAAAATTCATTATGTTGTGGAAGGAGAGGGGTTCCCAGTAGTTCTGATTCAT
GGATTTGGTGCTTCAGCTTTTCACTGGAGGTATAACATACCAGAACTGGCTAAAAAATAC
AAGGTTTATGCTGTGGATTTGATAGGATTTGGCTGGAGCGAGAAGGCACTAATAGACTAT
GATGCCTTGGTTTGGAGAGATCAAGTTGTCGACTTCTTGAAGGAGATAGTGAAAGAACCG
GCAGTTTTAGTGGGGAACAGTCTTGGAGGATTTACTGCTTTGGTAGCAGCAGCGTCACTC
ACCGATCAAGTCAAGGGAGTGTCACTACTGAATAGTGCAGGACAGTTTGGGGATGCCAGC
AGTGCAGCTAAAGAAACTGAAGAAACAGCCTTACAGAAACTTATTCTAAAGCCACTAAAG
GAAATCTTTCAACGTGTATTCCTTGGATTCTTATTCTGGCAAGCCAAGCAACCAGCTCGT
ATTGAGTCTGTTCTGAAGAGCGTCTACAAAGATTCTTCAAACGTGGACGATTATCTCATC
GATTCAATCACCAGACCTGCAGATGACCCAAATGCAGGAGAGGTTTATTACCGACTGATG
ACAAGATTCATGTCAAACCAGAGAAAGTATACACTTGATAGTGTGTTGAGACAACTTTCT
TGCCCATTGCTGTTATTATGGGGTGACCTAGACCCTTGGGTTGGTCCTGCCAAGGCCAAC
CGGATTAAGGAGTTCTATCCGAACACAACCGTCGTTAACCTGCAGGCAGGACATTGTCCC
CACGATGAAGTTCCAGAACTAGTGAATAAAGCTCTATTGGATTGGTTGTCAACCACGGTG
ACACCGGCATCAGAAGTTTAA

Peptide Sequence

PEP ID

XP_016462402.1
PEP Infomation

PREDICTED: pheophytinase, chloroplastic-like [Nicotiana tabacum]
Sequence

MSTSCATVRTECLNSVGNRLAVPARINHFRGKCELNRRNFALNGIVAAGASVMTPSVVAE
PSKGLDKLPFKPEGYNYWTWRGHKIHYVVEGEGFPVVLIHGFGASAFHWRYNIPELAKKY
KVYAVDLIGFGWSEKALIDYDALVWRDQVVDFLKEIVKEPAVLVGNSLGGFTALVAAASL
TDQVKGVSLLNSAGQFGDASSAAKETEETALQKLILKPLKEIFQRVFLGFLFWQAKQPAR
IESVLKSVYKDSSNVDDYLIDSITRPADDPNAGEVYYRLMTRFMSNQRKYTLDSVLRQLS
CPLLLLWGDLDPWVGPAKANRIKEFYPNTTVVNLQAGHCPHDEVPELVNKALLDWLSTTV
TPASEV

Transcript Sequence

Gene sequence data has not been registered.